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View Structure Prediction Details

Protein: GDL27_ARATH, GDL...
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL27_ARATH, GDL....

Description E-value Query
Range
Subject
Range
gi|42565424 - gi|42565424|ref|NP_189941.2| carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase [...
337.0 [0..1] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQILLFAL VLIFVEANAA TQGKNTTIPA LIVFGDSIMD TGNNNNLPTL LKCNFPPYGK  60
   61 DYPGGFATGR FSDGRVPSDL IAEKLGLAKT LPAYMNPYLK PEDLLKGVTF ASGGTGYDPL 120
  121 TAKIMSVISV WDQLINFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQTH 180
  181 RYDRTSYANF LADSAVHFVR ELHKLGARKI GVFSAVPVGC VPLQRTVFGG FFTRGCNQPL 240
  241 NNMAKQFNAR LSPALDSLDK ELDGVILYIN VYDTLFDMIQ HPKKYGFEVA DRGCCGKGLL 300
  301 AISYLCNSLN PFTCSNSSAY IFWDSYHPSE RAYQVIVDNL LDKYLSKVY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.31
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle