| Protein: | CAAT5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAAT5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
416.0 | [0..16] | [567..935] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MEGEERGYWR WSKRDFFPEE SFQSFGSYRA ALSQTCSRFK NRLVSRSDDE NERFELKKQS 60
61 EH
|
| Detection Method: |  |
| Confidence: | 1.08 |
| Match: | 4hb1A |
| Description: | A DESIGNED FOUR HELIX BUNDLE PROTEIN. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [63-450] |
1 11 21 31 41 51
| | | | | |
1 EMKRCLTWWD LVWFGFGSVI GAGIFVLTGQ EAHEQAGPAI VLSYVVSGLS AMLSVFCYTE 60
61 FAVEIPVAGG SFAYLRIELG DFAAFITAGN ILLESIVGTA AVARAWTSYF ATLLNRSPNA 120
121 LRIKTDLSSG FNLLDPIAVV VIAASATIAS ISTRKTSLLN WIASAINTLV IFFVIIAGFI 180
181 HADTSNLTPF LPFGPEGVFR AAAVVYFAYG GFDSIATMAE ETKNPSRDIP IGLLGSMSII 240
241 TVIYCLMALS LSMMQKYTDI DPNAAYSVAF QSVGMKWGKY LVALGALKGM TTVLLVGALG 300
301 QARYVTHIAR THMIPPIFAL VHPKTGTPIN ANLLVAIPSA LIAFFSGLDV LASLLSISTL 360
361 FIFTMMPIAL LVRRYYVRQD TPRVHLIK
|
| Detection Method: | |
| Confidence: | 1.25 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [451-569] |
1 11 21 31 41 51
| | | | | |
1 LITCLLFVVV SSMGTSAYWG MQRKGSWIGY TVTVPFWFLG TLGIVFFVPQ QRTPKVWGVP 60
61 LVPWLPCLSI ATNIFLMGSL GAMAFVRFGV CTLAMLLYYF LLGLHATFDM AHQQIVPRT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
