| Protein: | VILI1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 909 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VILI1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1050.0 | [0..1] | [909..1] |
|
Region A: Residues: [1-735] |
1 11 21 31 41 51
| | | | | |
1 MSRLSKDIDS AFQGVGTKSG LEIWCVYNKQ LISIPKSSFG KFHSGNAYLV LRTFLRKIES 60
61 PQYDIHYWLG IDANEVDSIL ASDKALDLDA ALGCCTVQYR EVQGQETEKF LSYFKPCIIP 120
121 VEGKYSPKTG IAGETYQVTL LRCKGDHVVR VKEVPFLRSS LNHDDVFILD TASKVFLFAG 180
181 CNSSTQEKAK AMEVVEYIKD NKHDGRCEVA TIEDGKFSGD SDAGEFWSFF GGYAPIPKLS 240
241 SSTTQEQTQT PCAELFWIDT KGNLHPTGTS SLDKDMLEKN KCYMLDCHSE VFVWMGRNTS 300
301 LTERKTSISS SEEFLRKEGR STTTSLVLLT EGLENARFRS FFNKWPQTVE SSLYNEGREK 360
361 VAALFKQKGY DVEELPDEED DPLYTNCRDN LKVWRVDGDD VSLLSIPDQT KLFTGDCYLV 420
421 QYKYTYKERT EHLLYVWIGC ESIQQDRADA ITNASAIVGT TKGESVLCHI YQGNEPSRFF 480
481 PMFQSLVVFK GGLSRRYKVL LAEKEKIGEE YNENKASLFR VVGTSPRNMQ AIQVNLVATS 540
541 LNSSYSYILQ YGASAFTWIG KLSSDSDHEV LDRMLYFLDT SCQPIYIREG NETDTFWNLL 600
601 GGKSEYPKEK EMRKQIEEPH LFTCSCSSDV LKVKEIYNFV QDDLTTEDVF LLDCQSEVYV 660
661 WIGSNSNIKS KEEALTLGLK FLEMDILEEG LTMRTPVYVV TEGHEPPFFT RFFEWVPEKA 720
721 NMHGNSFERK LASLK
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 2fghA |
| Description: | No description for 2fghA was found. |
|
Region A: Residues: [736-830] |
1 11 21 31 41 51
| | | | | |
1 GKKTSTKRSS GSQYRSQSKD NASRDLQSRS VSSNGSERGV SPCSSEKLLS LSSAEDMTNS 60
61 SNSTPVVKKL FSESLLVDPN DGVARQESSS KSDIS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [831-909] |
1 11 21 31 41 51
| | | | | |
1 KQKPRVGINS DLSSLESLAY SYEQLRVDSQ KPVTDIDATR REAYLTEKEF EERFGMAKSE 60
61 FYALPKWKQN KLKISLHLF
|
| Detection Method: | |
| Confidence: | 23.522879 |
| Match: | 1ujsA |
| Description: | Solution structure of the Villin headpiece domain of human actin-binding LIM protein homologue (KIAA0843 protein) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 5.53385110100387 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.11554260532242 | bayes_pls_golite062009 |
| binding | 2.42849959483419 | bayes_pls_golite062009 |
| protein binding | 1.84182032292601 | bayes_pls_golite062009 |
| PDZ domain binding | 0.351516306039841 | bayes_pls_golite062009 |
