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View Structure Prediction Details

Protein: gi|7486855, gi|7...
Organism: Arabidopsis thaliana
Length: 248 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7486855, gi|7....

Description E-value Query
Range
Subject
Range
gi|73974854 - gi|73974854|ref|XP_532348.2| PREDICTED: similar to glutamate receptor, ionotropic, N-methyl D-aspara...
195.0 [0..2] [246..254]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQWNLPYRK DDVETGVSSR RPLLYPAMHE NPELRWGFIR KVYSIIAFQL LATVAVAATV  60
   61 VTVRPIALFF ATTGLGLALY IVIIITPLIV LCPLYYYHQK HPVNYLLLGI FTLALA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVVGLTCAFT NGKVILESVI LTSVVVLSLT LYTFWAARKG YDFNFLGPFL FGALTVLIFF  60
   61 ALIQILFPLG RVSVMIYGCL VSIIFCGYIV YDTDNLIKRH TYDEYIWAAV SLYLDIINLF 120
  121 LYLLTVLRAL QR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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