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View Structure Prediction Details

Protein: BGAL5_ARATH
Organism: Arabidopsis thaliana
Length: 732 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BGAL5_ARATH.

Description E-value Query
Range
Subject
Range
gi|57232107 - gi|57232107|gb|AAW47739.1| beta-galactosidase [Prunus persica]
794.0 [0..30] [732..27]

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Predicted Domain #1
Region A:
Residues: [1-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE  60
   61 MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD LVRFIKTIQE VGLYVHLRIG 120
  121 PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII 180
  181 LSQIENEFEP DLKGLGPAGH SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC 240
  241 DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG 300
  301 TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL 360
  361 GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL PAWSISILPD CRNVVFNTAT 420
  421 VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.0
Match: 1tg7A
Description: Native structure of beta-galactosidase from Penicillium sp.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [468-732]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRDTTDYLWY TTSVDIKASE SFLRGGKWPT LTVDSAGHAV HVFVNGHFYG SAFGTRENRK  60
   61 FSFSSQVNLR GGANKIALLS VAVGLPNVGP HFETWATGIV GSVVLHGLDE GNKDLSWQKW 120
  121 TYQAGLRGES MNLVSPTEDS SVDWIKGSLA KQNKQPLTWY KAYFDAPRGN EPLALDLKSM 180
  181 GKGQAWINGQ SIGRYWMAFA KGDCGSCNYA GTYRQNKCQS GCGEPTQRWY HVPRSWLKPK 240
  241 GNLLVLFEEL GGDISKVSVV KRSVN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.62
Match: 1bhgA
Description: beta-Glucuronidase; beta-Glucuronidase, domain 3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle