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View Structure Prediction Details

Protein: LACS4_ARATH
Organism: Arabidopsis thaliana
Length: 666 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LACS4_ARATH.

Description E-value Query
Range
Subject
Range
LACS5_ARATH - Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana GN=LACS5 PE=2 SV=1
515.0 [0..1] [664..1]

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Predicted Domain #1
Region A:
Residues: [1-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN  60
   61 NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG VKDEAKCGIY GANSPEWIIS 120
  121 MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV 180
  181 SFGGVSREQK EEAETFGLVI YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG 240
  241 VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW 300
  301 RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK 360
  361 KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS HVESFLRVVA CCHVLQGYGL 420
  421 TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS 480
  481 GYYKREDLTK EVLIDGWLHT GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG 540
  541 EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL 600
  601 VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA 660
  661 KFASRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 117.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle