| Protein: | MSSP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 734 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSSP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
341.0 | [0..1] | [734..1] |
|
|
297.0 | [0..208] | [731..82] |
|
|
285.0 | [0..1] | [727..1] |
|
|
282.0 | [0..239] | [719..91] |
|
|
273.0 | [0..220] | [733..371] |
|
|
272.0 | [0..14] | [730..14] |
|
|
272.0 | [0..244] | [725..249] |
|
Region A: Residues: [1-413] |
1 11 21 31 41 51
| | | | | |
1 MKGATLVALA ATIGNFLQGW DNATIAGAMV YINKDLNLPT SVQGLVVAMS LIGATVITTC 60
61 SGPISDWLGR RPMLILSSVM YFVCGLIMLW SPNVYVLCFA RLLNGFGAGL AVTLVPVYIS 120
121 ETAPPEIRGQ LNTLPQFLGS GGMFLSYCMV FTMSLSDSPS WRAMLGVLSI PSLLYLFLTV 180
181 FYLPESPRWL VSKGRMDEAK RVLQQLCGRE DVTDEMALLV EGLDIGGEKT MEDLLVTLED 240
241 HEGDDTLETV DEDGQMRLYG THENQSYLAR PVPEQNSSLG LRSRHGSLAN QSMILKDPLV 300
301 NLFGSLHEKM PEAGGNTRSG IFPHFGSMFS TTADAPHGKP AHWEKDIESH YNKDNDDYAT 360
361 DDGAGDDDDS DNDLRSPLMS RQTTSMDKDM IPHPTSGSTL SMRRHSTLMQ GNG
|
| Detection Method: |  |
| Confidence: | 17.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [414-493] |
1 11 21 31 41 51
| | | | | |
1 ESSMGIGGGW HMGYRYENDE YKRYYLKEDG AESRRGSIIS IPGGPDGGGS YIHASALVSR 60
61 SVLGPKSVHG SAMVPPEKIA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.841 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.841 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.710 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.710 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.665 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.665 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.626 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.587 | d.52.9 | Description not found. |
| View | Download | 0.562 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
|
Region A: Residues: [494-734] |
1 11 21 31 41 51
| | | | | |
1 ASGPLWSALL EPGVKRALVV GVGIQILQQF SGINGVLYYT PQILERAGVD ILLSSLGLSS 60
61 ISASFLISGL TTLLMLPAIV VAMRLMDVSG RRSLLLWTIP VLIVSLVVLV ISELIHISKV 120
121 VNAALSTGCV VLYFCFFVMG YGPIPNILCS EIFPTRVRGL CIAICAMVFW IGDIIVTYSL 180
181 PVLLSSIGLV GVFSIYAAVC VISWIFVYMK VPETKGMPLE VITDYFAFGA QAQASAPSKD 240
241 I
|
| Detection Method: | |
| Confidence: | 2.27 |
| Match: | 2gfpA |
| Description: | No description for 2gfpA was found. |
