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View Structure Prediction Details

Protein: URH1_ARATH
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for URH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|13472783, gi|... - gi|14023530|dbj|BAB50136.1| nucleoside hydrolase [Mesorhizobium loti MAFF303099], gi|13472783|ref|NP...
376.0 [0..18] [335..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCGMENCNG GISNGDVLGK HEKLIIDTDP GIDDSMAILM AFQTPELEIL GLTTVFGNVS  60
   61 TQDATRNALL LCEIAGFPDV PVAEGSSEPL KGGIPRVADF VHGKNGLGDV SLPPPSRKKS 120
  121 EKSAAEFLDE KVEEYPGEVT ILALGPLTNL ALAIKRDSSF ASKVKKIVIL GGAFFSLGNV 180
  181 NPAAEANIYG DPEAADVVFT SGADITVVGI NITTQLKLSD DDLLELGNCK GKHSKLISDM 240
  241 CKFYRDWHVK SDGVYGVYLH DPVSFVAVVR PDLFTYKKGV VRVETQGICV GHTLMDQGLK 300
  301 RWNGSNPWVG YSPISVAWTV DVEGVLEYVK AKLMKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 1yoeA
Description: Crystal structure of a the E. coli pyrimidine nucleoside hydrolase YbeK with bound ribose
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle