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View Structure Prediction Details

Protein: gi|8885600, gi|2...
Organism: Arabidopsis thaliana
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8885600, gi|2....

Description E-value Query
Range
Subject
Range
NAC86_ARATH - NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1
297.0 [0..1] [292..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSCLPPGF RFHPTDEELI EYYLKRKVEG LEIELEVIPV IDLYSFDPWE LPDKSFLPNR  60
   61 DMEWYFFCSR DKKYPNGFRT NRGTKAGYWK ATGKDRKITS RSSSIIGYRK TLVFYKGRAP 120
  121 LGDRSNWIMH EYRLCDDDTS QGSQNLKGAF VLCRVAMKNE IKTNTKIRKI PSEQTIGSGE 180
  181 SSGLSSRVTS PSRDETMPFH SFANPVSTET DSSNIWIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.154902
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [219-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEFILDSSKD YPQIQDVASQ CFQQDFDFPI IGNQNMEFPA STSLDQNMDE FMQNGYWTNY  60
   61 GYDQTGLFGY SDFS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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