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View Structure Prediction Details

Protein: NPR5_ARATH
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPR5_ARATH.

Description E-value Query
Range
Subject
Range
gi|115951940 - gi|115951940|ref|XP_001184381.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
486.0 [0..3] [489..73]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS  60
   61 PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.15
Match: 1buoA
Description: Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [98-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVFLLLLQFL YSGQVSIVPQ KHEPRPNCGE RGCWHTHCSA AVDLALDTLA ASRYFGVEQL  60
   61 ALLTQKQLAS MVEKASIEDV MKVLIASRKQ DMHQLWTTCS HLVAKSGLPP EILAKHLPID 120
  121 VVTKIEELRL KSSIARRSLM PHNHHHDLSV AQDLEDQKIR RMRRALDSSD VELVKLMVMG 180
  181 EGLNLDESLA LHYAVESCSR EVVKALLELG AADVNYPAGP AGKTPLHIAA EMVSPDMVAV 240
  241 LLDHHADPNV RTVGGITPLD ILRTLTSDFL FKGAVPGLTH IEPNKLRLCL ELVQSAAMVI 300
  301 SREEGNNSNN QNNDNNTGIY PHMNEEHNSG SSGGSNNNLD SRLVYLNLGA GTGQMGPGRD 360
  361 QGDDHNSQRE GMSRHHHHHQ DPSTMYHHHH QHHF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.221849
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle