YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|25366911, gi|...
Organism: Arabidopsis thaliana
Length: 448 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25366911, gi|....

Description E-value Query
Range
Subject
Range
gi|15218824, gi|... - gi|9280665|gb|AAF86534.1|AC002560_27 F21B7.14 [Arabidopsis thaliana], pir||T00906 hypothetical prote...
455.0 [0..1] [448..1]

Back

Predicted Domain #1
Region A:
Residues: [1-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVYRKLIW IRDPLARLKR HVSSHSGFRF FRDRKWMFPF LASLVLSVTL LMSVLYVQLE  60
   61 TSYVEEPLPF DNLSEETNDY FVESQLRMSL NSTLDSTSSE VPRLAYLISG TKGDSLRMMR 120
  121 TLQAVYHPRN QYVLHLDLEA PPKERLELAM SVKSDQTFRE VENVRVMSQS NLVTYKGPTM 180
  181 IACTLQAVAI LLKESLDWDW FINLSASDYP LVTQDDMLYV FANLSRNVNF IEHMKLTGWK 240
  241 LNQRAKSIIV DPGLYLSKKT EIAWTTQHRS LPTSFTLFTG SAWVVLTRSF LEYSILGWDN 300
  301 FPRTILMYYT NFVSSPEGYF HTLICNTEEF KSTAIGHDLH YIAWDYPPKQ HPNSLSMKDF 360
  361 DKMVKSKAPF ARKFHKNDPV LDKIDRELLG RTHRFSSGAW CIGSSENGAD PCSVRGDDSA 420
  421 LKPGPGAERL KELLQTLLSD EFRIKQCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.09691
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle