YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|17978797, gi|...
Organism: Arabidopsis thaliana
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17978797, gi|....

Description E-value Query
Range
Subject
Range
gi|162459719, gi... - gi|162459719|ref|NP_001105068.1| silencing group B protein [Zea mays], gi|14550116|gb|AAK67148.1|AF3...
162.0 [0..1] [185..1]

Back

Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCIRRATVD DLLAMQACNL MCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK  60
   61 MEEESNECHG HITSLAVLRT HRKLGLATKL MTAAQAAMEQ VYEAEYVSLH VRRSNRAAFN 120
  121 LYTETLGYKI NDVEAKYYAD GEDAYDMRKN LKGKQNHHHA HGHHHHHGGG CCSGDAKVVE 180
  181 TAQAVDGKAV SK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 2cnmA
Description: No description for 2cnmA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle