| Protein: | BAM1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 575 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAM1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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862.0 | [0..1] | [575..1] |
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840.0 | [0..1] | [575..1] |
|
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832.0 | [0..12] | [566..437] |
|
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806.0 | [0..12] | [554..12] |
|
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805.0 | [0..30] | [550..6] |
|
|
797.0 | [0..94] | [569..1] |
|
|
795.0 | [0..94] | [568..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MALNLSHQLG VLAGTPIKSG EMTDSSLLSI SPPSARMMTP KAMNRNYKAH GTDPSPPMSP 60
61 ILGATRADLS VACKAFAVEN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.629 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.493 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.475 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.442 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.442 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.438 | a.65.1 | Annexin |
| View | Download | 0.438 | a.65.1 | Annexin |
| View | Download | 0.410 | a.4.1 | Homeodomain-like |
| View | Download | 0.410 | a.4.1 | Homeodomain-like |
| View | Download | 0.309 | a.4.12 | TrpR-like |
|
Region A: Residues: [81-575] |
1 11 21 31 41 51
| | | | | |
1 GIGTIEEQRT YREGGIGGKK EGGGGVPVFV MMPLDSVTMG NTVNRRKAMK ASLQALKSAG 60
61 VEGIMIDVWW GLVEKESPGT YNWGGYNELL ELAKKLGLKV QAVMSFHQCG GNVGDSVTIP 120
121 LPQWVVEEVD KDPDLAYTDQ WGRRNHEYIS LGADTLPVLK GRTPVQCYAD FMRAFRDNFK 180
181 HLLGETIVEI QVGMGPAGEL RYPSYPEQEG TWKFPGIGAF QCYDKYSLSS LKAAAETYGK 240
241 PEWGSTGPTD AGHYNNWPED TQFFKKEGGG WNSEYGDFFL SWYSQMLLDH GERILSSAKS 300
301 IFENMGVKIS VKIAGIHWHY GTRSHAPELT AGYYNTRFRD GYLPIAQMLA RHNAIFNFTC 360
361 IEMRDHEQPQ DALCAPEKLV NQVALATLAA EVPLAGENAL PRYDDYAHEQ ILKASALNLD 420
421 QNNEGEPREM CAFTYLRMNP ELFQADNWGK FVAFVKKMGE GRDSHRCREE VEREAEHFVH 480
481 VTQPLVQEAA VALTH
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| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1ukoA |
| Description: | Crystal structure of soybean beta-amylase mutant substituted at surface region |
Matching Structure (courtesy of the PDB): |
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