| Protein: | ALFL3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALFL3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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292.0 | [0..1] | [249..1] |
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291.0 | [0..1] | [249..1] |
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290.0 | [0..1] | [250..1] |
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285.0 | [0..1] | [249..1] |
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282.0 | [0..1] | [249..1] |
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281.0 | [0..1] | [249..1] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MEGGAALYNP RTVEEVFKDF KGRRTAIVKA LTTDVQEFYQ QCDPEKENLC LYGLPNEEWE 60
61 VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD AWLLSVSFYF GSRFS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.545 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.385 | N/A | N/A | a.11.2 | Second domain of FERM |
| View | Download | 0.385 | N/A | N/A | a.11.2 | Second domain of FERM |
| View | Download | 0.378 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.378 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.360 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.360 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.359 | N/A | N/A | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.329 | N/A | N/A | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.312 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.279 | N/A | N/A | d.26.1 | FKBP-like |
|
Region A: Residues: [116-190] |
1 11 21 31 41 51
| | | | | |
1 FHKEERKRLF NMINDVPTIF EVVTGMAKAK DKSSAANQNG NKSKSNSKVR TSEGKSSKTK 60
61 QPKEEDEEID EDDED
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [191-250] |
1 11 21 31 41 51
| | | | | |
1 DHGETLCGAC GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA 60
61
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| Detection Method: | |
| Confidence: | 12.09691 |
| Match: | 1we9A |
| Description: | Solution structure of PHD domain in nucleic acid binding protein-like NP_197993 |
Matching Structure (courtesy of the PDB): |
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