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View Structure Prediction Details

Protein: PDI23_ARATH
Organism: Arabidopsis thaliana
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDI23_ARATH.

Description E-value Query
Range
Subject
Range
gi|25292646, gi|... - gi|7211992|gb|AAF40463.1|AC004809_21 Strong simialrity to the disulfide isomerase precursor homolog ...
323.0 [0..1] [440..1]

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Predicted Domain #1
Region A:
Residues: [1-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKSPLTLLT LLTICFGFFD LSSALYGSSS PVVQLTASNF KSKVLNSNGV VLVEFFAPWC  60
   61 GHCKALTPTW EKVANILKGV ATVAAIDADA HQSAAQDYGI KGFPTIKVFV PGKAPIDYQG 120
  121 ARDAKSIANF AYKQIKGLLS DRLEGKSKPT GGGSKEKKSE PSASVELNAS NFDDLVIESN 180
  181 ELWIVEFFAP WCGHCKKLAP EWKRAAKNLQ GKVKLGHVNC DVEQSIMSRF KVQGFPTILV 240
  241 FGPDKSSPYP YEGARSASAI ESFASELVES SAGPVEVTEL TGPDVMEKKC GSAAICFISF 300
  301 LPDILDSKAE GRNKYLEMLL SVAEKFKKQP YSFMWVAAVT QMDLEKRVNV GGYGYPAMVA 360
  361 MNVKKGVYAP LKSAFELQHL LEFVKDAGTG GKGNVPMNGT PEIVKTKEWD GKDGELIEED 420
  421 EFSLDELMGG DDAVGSKDEL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle