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View Structure Prediction Details

Protein: B561Q_ARATH
Organism: Arabidopsis thaliana
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B561Q_ARATH.

Description E-value Query
Range
Subject
Range
B561H_ARATH - Cytochrome b561 and DOMON domain-containing protein At3g59070 OS=Arabidopsis thaliana GN=At3g59070 P...
245.0 [0..1] [255..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLSSRTIFV GLCFLFVLAP CFTRATTNEV QVSCDSHNFN NGKHFRSCVD LPVLDSFLHY  60
   61 SYVRETGVLE VAYRHTNIES SSWIAWGINP TSKGMIGAQT LLAYRNSTSG FMRAYTSSIN 120
  121 GYTPMLQEGP LSFRVTQLSA EYLNREMTIF ATMVWPSNTT VVNHLWQDGP LKEGDRLGMH 180
  181 AMSGNHLKSM ANLDLL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.09
Match: 1d7cA
Description: Cytochrome domain of cellobiose dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [197-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGQVMTTKAA NDNMLLVKSI HGLVNAVCWG IFIPIGVMAA RYMRTYKGLD PTWFYILIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle