| Protein: | PTR8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 587 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..5] | [567..10] |
|
Region A: Residues: [1-441] |
1 11 21 31 41 51
| | | | | |
1 MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI 60
61 TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA CFLGSVAMDL TAVIHPLHPA 120
121 QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES 180
181 FFNWYFFTFT FAQMVSLTLI VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS 240
241 GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD 300
301 KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR 360
361 LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT GRDGGITQLQ RVGAGLFLCI 420
421 TSMMVSAIVE QYRRKVALTK P
|
| Detection Method: |  |
| Confidence: | 7.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [442-587] |
1 11 21 31 41 51
| | | | | |
1 TLGLAPRKGA ISSMSGMWLI PQLVLMGIAD ALAGVGQMEF YYKQFPENMR SFAGSLYYCG 60
61 IGLASYLSTF LLSAVHDTTE GFSGGSWLPE DLNKGRLEYF YFLVAGMMTL NLAYFLLVSH 120
121 WYRYKDVVAK DKDMDKTSAE FDKVSV
|
| Detection Method: | |
| Confidence: | 1.57 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
