YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TIC21_ARATH
Organism: Arabidopsis thaliana
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIC21_ARATH.

Description E-value Query
Range
Subject
Range
gi|75700738, gi|... - gi|75907013|ref|YP_321309.1| hypothetical protein Ava_0790 [Anabaena variabilis ATCC 29413], gi|7570...
245.0 [0..91] [282..11]

Back

Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSLLLPPAS SSGVSAVALR PGFQHSFNHQ SLSTRSLPLF NPLLLAPKKK TTISSYQSPP  60
   61 SLSVYGFQIG GSKPSFTPST VAFSYPTSPS SVPGDNEVDK AKLAQVAKRL EKTSRYFKRL 120
  121 GSIGFWGQLV STVVAAVILS FSIVVTGKPT SPATFYATAS GIAAAFVSVF WSFGYIRLSE 180
  181 RLRRTSIDPA KA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [193-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPRADVVKGL RSGIMVNILG MGSALLGMQA TVGFLVAKAL TTSANPFYQG VSQGYSPVLA  60
   61 LDVFLVQASA NTLLSHFLGL VCSLELLRSV TVPNSESVVV PKVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle