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View Structure Prediction Details

Protein: PEN6_ARATH
Organism: Arabidopsis thaliana
Length: 767 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEN6_ARATH.

Description E-value Query
Range
Subject
Range
BAMS_BETPL - Beta-amyrin synthase OS=Betula platyphylla GN=OSCBPY PE=1 SV=1
1160.0 [0..1] [766..1]

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Predicted Domain #1
Region A:
Residues: [1-767]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRLKIGAKG GDETHLFTTN NYTGRQTWEF DADACSPEEL AEVDEARQNF SINRSRFKIS  60
   61 ADLLWRMQFL REKKFEQKIP RVEIGDAENI TYKDAKTALR RGILYFKALQ AEDGHWPAEN 120
  121 SGCLFFEAPF VICLYITGHL EKILTLEHRK ELLRYMYNHQ NEDGGWGIHV EGQSAMFCTV 180
  181 INYICLRILG VEADLDDIKG SGCARARKWI LDHGGATYTP LIGKAWLSIL GVYDWSGCKP 240
  241 IPPEVWMLPT FSPFNGGTLW IYFRDIFMGV SYLYGKKFVA TPTPLILQLR EELYPQPYDK 300
  301 ILWSQARNQC AKEDLYYPQS FLQEMFWKCV HILSENILNR WPCNKLIRQK ALRTTMELLH 360
  361 YQDEASRYFT GGCVPKPFHM LACWVEDPDG DYFKKHLARV PDYIWIGEDG LKIQSFGSQL 420
  421 WDTAFSLQVM LAYQDVDDDD DEIRSTLIKG YSFLNKSQLT QNPPGDHRKM LKDIAKGGWT 480
  481 FSDQDQGWPV SDCTAESLEC CLVFGSMPSE LIGEKMDVER LYDAVNLLLY FQSKNGGITV 540
  541 WEAARGRTWL EWLSPVEFME DTIVEHEYVE CTGSAIVALA RFLKEFPEHR REEVEKFIKN 600
  601 AVKYIESFQM PDGSWYGNWG VCFMYGTFFA VRGLVAAGKT YQNCEPIRKA VQFILETQNV 660
  661 EGGWGESYLS CPNKKYTLLE GNRTNVVNTG QALMVLIMGG QMERDPLPVH RAAKVLINSQ 720
  721 LDNGDFPQEE IMGVFKMNVM VHYATYRNIF TLWALTYYTK ALRVPLC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1w6kA
Description: Structure of human OSC in complex with Lanosterol
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle