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View Structure Prediction Details

Protein: gi|51968478, gi|...
Organism: Arabidopsis thaliana
Length: 426 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51968478, gi|....

Description E-value Query
Range
Subject
Range
gi|21536770 - gi|21536770|gb|AAM61102.1| putative UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosamineph...
288.0 [0..1] [426..1]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARKRTPSV SNSEKLALPE PASSPTVQKT SVSGEDFQLA PPKLGVIFVI SSLLCSLYLY  60
   61 LLCFHYNVDN ELKRPILINA GLSLVGFFVT LKLIPVAARY VLRRNMFGFD INKRGTPQGE 120
  121 VRVPESLGIV VGIVFLIVAI VFQFFNFTED SV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WLVEYNAALA SICFMILLGF VDDVLDVPWR VKLLLPSFAT LPLLMAYAGH TTIVIPKPLV  60
   61 SYIGLEVFDL GRIYKLYMAL LAVFCTNSIN IHAGLNGLEI GQTVVIAAAI LIHNVMQIGA 120
  121 SVDTEYHQAH AFSIYLTQPL MATSLAMLAY NWYPSAVFVG DTYTVFAGMT MAVVGILGHF 180
  181 SETL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 82.065502
Match: PF00953.12
Description: No description for PF00953.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [337-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIFFLPQVLN FLLSLPQLAG IVKCPRHRLP KYDPATGLLT GTKDGTLVNV YLRIFGRKTE  60
   61 KSLCIHLLVF QALACAFCFM LRHFLAGWYK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle