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View Structure Prediction Details

Protein: gi|15223632, gi|...
Organism: Arabidopsis thaliana
Length: 172 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15223632, gi|....

Description E-value Query
Range
Subject
Range
gi|25453542, gi|... - gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana], pir||T52346 di...
195.0 [0..2] [172..32]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSLSLS FPSSSLSRTW DYDVFPSFHG EDVRKAFLSQ ILKKEFGRKA INFFVDHEME  60
   61 RGEFIGPVLK QAIKGSKIAL VLLSKNYASS WCCLDELVEI MKKESGQTVI TIFYEVDPNE 120
  121 VKKQTGDFGK AFKETCQGKT EEKVQTWRKA LEGVGLATIA GFHSSNWFVF FI

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Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 1fywA
Description: Toll-like receptor 2, TLR2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.261666574457319 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle