| Protein: | gi|12322899, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 663 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322899, gi|....
| Description | E-value | Query Range |
Subject Range |
|
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189.0 | [0..11] | [661..442] |
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184.0 | [0..3] | [661..60] |
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178.0 | [0..10] | [661..314] |
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175.0 | [0..16] | [662..396] |
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170.0 | [0..18] | [652..184] |
|
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170.0 | [0..57] | [662..21] |
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161.0 | [0..57] | [662..21] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MLNHCDRNQG GYSLGVRCSS YKLFIMPSRR SESAIRLITY SEELVDGKPF FAFSNCLPVK 60
61 ALNREPAGHA FHSAALKLHG C
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.638 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.638 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.609 | d.300.1 | Description not found. |
| View | Download | 0.582 | b.40.6 | MOP-like |
| View | Download | 0.582 | b.40.6 | MOP-like |
| View | Download | 0.571 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.557 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.530 | b.36.1 | PDZ domain-like |
| View | Download | 0.483 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.479 | b.36.1 | PDZ domain-like |
|
Region A: Residues: [82-197] |
1 11 21 31 41 51
| | | | | |
1 AEEPTDDEGG DKKVGDDKEK EYVPSFNSYA NKGKKKSGTQ QQDHYALLGL SNLRYLATED 60
61 QIRKSYREAA LKHHPDKLAK AKEAKKDEIE SRFKAIQEAY EVLMDPTRRR IFDSTD
|
| Detection Method: | |
| Confidence: | 12.30103 |
| Match: | 2ctpA |
| Description: | Solution structure of J-domain from human DnaJ subfamily B menber 12 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [198-273] |
1 11 21 31 41 51
| | | | | |
1 EFDDEVPSDC LPQDFFKVFG PAFKRNARWS VNQRIPDLGD ENTPLKDVDK FYNFWYAFKS 60
61 WREFPDEEEH DLEQAD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.639 | a.8.9 | Description not found. |
| View | Download | 0.584 | a.64.1 | Saposin |
| View | Download | 0.584 | a.64.1 | Saposin |
| View | Download | 0.536 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.536 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.469 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.453 | a.8.11 | Description not found. |
| View | Download | 0.357 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.335 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.325 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [274-663] |
1 11 21 31 41 51
| | | | | |
1 SREERRWMEK ENAKKTVKAR KEEHARIRTL VDNAYRKDPR IVKRKEEEKA EKQQKKDAKI 60
61 QAKKKQEEDA AIAAEEEKRR KEEEEKRAAE SAQQQKKTKE REKKLLRKER NRLRTLSAPL 120
121 VAQRLLDISE EDIENLCMSL NTEQLQNLCD KMGNKEGLEL AKVIKDGCNS SRNDEAESKE 180
181 KVSKKTNGGT EPTTRVSQLD SSTQKKQPWS KEEIDMLRKG MIKYPKGTSR RWEVISEYIG 240
241 TGRSVEEILK ATKTVLLQKP DSAKAFDSFL EKRKPSASIT SPLSTREELG ESLPTMTTTT 300
301 NAKPSKETVV GKSSSSQSSD NNGEVGGSSD ADSWSTVQER ALVQALKTFP KETSQRWERV 360
361 AAAVPGKTMN QCKKKFAELK EIIRNKKTGV
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| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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