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View Structure Prediction Details

Protein: GDL89_ARATH
Organism: Arabidopsis thaliana
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL89_ARATH.

Description E-value Query
Range
Subject
Range
gi|92886160 - gi|92886160|gb|ABE88162.1| Lipolytic enzyme, G-D-S-L [Medicago truncatula]
311.0 [0..1] [331..1]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLVIQTTI VLVSVISVSI VHAGNIPAVI AFGDSILDTG NNNYLMTLTK VNFYPYGRDF  60
   61 VTRRATGRFG NGRIPTDLIA EGLGIKNIVP AYRSPFLEPN DILTGVSFAS GGSGLDPMTA 120
  121 RIQGVIWVPD QLNDFKAYIA KLNSITGDEE KTRSIISNAV FVISAGNNDI AITYFTNPIR 180
  181 NTRYTIFSYT DLMVSWTQSF IKELYNLGAR KFAIMGTLPL GCLPGASNAL GGLCLEPANA 240
  241 VARLFNRKLA DEVNNLNSML PGSRSIYVDM YNPLLELVKN PLRSGFISPT RPCCCAPAAP 300
  301 IPCLDASRYV FWDIAHPSEK AYQTIIPPII QQIQQSFA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.38
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.555413709926701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle