| Protein: | P2A06_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 392 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2A06_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
308.0 | [0..15] | [391..22] |
|
|
254.0 | [0..4] | [320..80] |
|
|
250.0 | [0..1] | [247..1] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MASSSSVVKP TPTGPQVFIC FRGADVRKHF ISFLVPALRE ANINVFIDEN EFLGSEMANL 60
61 LTRIEESELA LVIFSVDFTR SHRCLNELAK IKERKDQGRL IVIPIFYKVK PSAVKFLEGK 120
121 FGDNFRALER NNRHMLPITQ KWKEALESIP GSIGMPLAEQ SE
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [163-247] |
1 11 21 31 41 51
| | | | | |
1 RTDNDFINSM VIKIQQLLEN MAVRRNNEIE AQRKLVSIVP PKKPKGEANP QGGSMVPARK 60
61 PEREASQEGS SVVPSMVPAR DLDIT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [248-392] |
1 11 21 31 41 51
| | | | | |
1 HSEKPQKWTW STINEAPNSA EIEIATLNKV YWLKIVGTIT TENLTPGAKY EAVFVVKLEN 60
61 NASGWEQPVN LKLKVVQHDG DDDRVDRTEN LNDYIGQNWV DILAGVFVVP PKTTPATIIF 120
121 TMYQYEDKYK KKGLVVKGVA IRPTN
|
| Detection Method: | |
| Confidence: | 1.32 |
| Match: | 1h6xA |
| Description: | Xylan-binding domain |
Matching Structure (courtesy of the PDB): |
|
