| Protein: | gi|20197942, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 386 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197942, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
257.0 | [0..10] | [328..239] |
|
Region A: Residues: [1-243] |
1 11 21 31 41 51
| | | | | |
1 MGEVQEGPKV EQEKKPAATV VPVETTDGKP KSGGGDSAAA AAPPVAAVVS AFVYKVDMHC 60
61 EGCAKKIKRM VKHFDGVKDV TADTGGNKLL VVGKIDPVKL QEKLEEKTKR KVVLANPPPK 120
121 VEGPVAAAVG EKKADGGDKE AAPPAPAPAA PKESVVPLKI RLHCEGCIQK IKKIILKIKG 180
181 VETVAIDGAK DVVTVKGTID VKELVPLLTK KLKRTVEPLV PAKKDDGAAE NKKTEAAAPD 240
241 AKK
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1p6tA |
| Description: | Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.246147507070597 | bayes_pls_golite062009 |
|
Region A: Residues: [244-386] |
1 11 21 31 41 51
| | | | | |
1 EAPSAGVNEA KKEGSDGGEK KKEVGDGGEK KKEGGDGGEK KKEAGDGGEK KKDGGGVPAP 60
61 VAMVNKMDYY GYSAYPTAPM HWQEGHVYGQ SYSMTGQNYP VGGQSYPGSG YNYASESYVP 120
121 YAQPNVNAPG MFSDENPNGC SVM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
