| Protein: | ATL41_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 236 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATL41_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
140.0 | [0..23] | [236..174] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MSSNDRDHRR FNSDHHSFWP NPSTYDLNSK IMLAAVASLS GVILIVFALH LYARFVLRRR 60
61 REAFRGLPVI FRHPFEMPKR GLNPTVIASL PTFTVGATD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [100-158] |
1 11 21 31 41 51
| | | | | |
1 GVAASATECA VCLSVLKEQD KARELPNCKH IFHVDCVDTW LTTCSTCPVC RTEVEPRPR
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [159-236] |
1 11 21 31 41 51
| | | | | |
1 LEPEPREGPV GTAPQLLVET RLNLTVEAAS SSSSDNKTVV SPASRLNSFR KILTRERSSN 60
61 RINHSCPDQD RVADLERH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
