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View Structure Prediction Details

Protein: PHSA_ARATH
Organism: Arabidopsis thaliana
Length: 482 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHSA_ARATH.

Description E-value Query
Range
Subject
Range
gi|68373624 - gi|68373624|ref|XP_692242.1| PREDICTED: similar to Cationic amino acid transporter 3 (CAT-3) (Solute...
296.0 [0..22] [399..963]

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Predicted Domain #1
Region A:
Residues: [1-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYNMNEFA YGNLYDDDDG DVGGSSKEGN NSIQKVSMLP LVFLIFYEVS GGPFGAEGSV  60
   61 NAAGPLLALL GFVIFPFIWC IPEALITAEM STMFPINGGF VVWVSSALGT FWGFQVGWMK 120
  121 WLCGVIDNAL YPVLFLDYLK SAVPALATGL PRVASILILT LLLTYLNYRG LTIVGWTAVF 180
  181 MGVFSMLPFA VMSLVSIPQL EPSRWLVMDL GNVNWNLYLN TLLWNLNYWD SVSTLAGEVA 240
  241 NPKKTLPKAL CYGVIFVALS NFLPLLSGTG AIPLDRELWT DGYLAEVAKA IGGGWLQLWV 300
  301 QAAAATSNMG MFLAEMSSDS FQLLGMAELG ILPEIFAQRS RYGTPLLGIL FSASGVLLLS 360
  361 GLSFQEIIAA ENLLYCGGMI LEFIAFVRLR KKHPAASRPY KIPVGTVGSI LICVPPIVLI 420
  421 CLVIVLSTIK VALVSFVMVV IGFLMKPCLN HMDGKKWVKF SVCSDLAEFQ KENLDCEESL 480
  481 LR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.29
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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