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View Structure Prediction Details

Protein: GDL24_ARATH
Organism: Arabidopsis thaliana
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL24_ARATH.

Description E-value Query
Range
Subject
Range
gi|42565424 - gi|42565424|ref|NP_189941.2| carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase [...
333.0 [0..1] [342..1]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLQILLLAL VLIAVEANAV KQGINATIPA LIVFGDSIMD TGNNNNLPTL LKCNFPPYGK  60
   61 DYPGGDATGR FSDGRVPSDL IAEKLGLAKT LPAYMNSYLK PEDLLKGVTF ASRGTGYDPL 120
  121 TAKIMSVISV WDQLIYFKEY ISKIKRHFGE EKAKDILEHS FFLVVSSSND LAHTYLAQAH 180
  181 RYDRTSYANF LADSAVHFVR ELHKLGARKI GVFSAVPVGC VPLQRTVFGG FFTRGCNEPL 240
  241 NNMAKQFNAR LSPALDSLDK ELDGVILYIN VYDTLFDMIQ HPKKYGCCGK GLLTISYLCN 300
  301 SLNPFTCSNS SSYIFWDSYH PSERAYQVIV DNLLDKYLSK VY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.3
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle