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View Structure Prediction Details

Protein: LRKS5_ARATH
Organism: Arabidopsis thaliana
Length: 652 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRKS5_ARATH.

Description E-value Query
Range
Subject
Range
gi|125557122 - gi|125557122|gb|EAZ02658.1| hypothetical protein OsI_24769 [Oryza sativa Indica Group]
gi|34395075, gi|... - gi|50933973|ref|XP_476514.1| putative receptor kinase Lecrk [Oryza sativa (japonica cultivar-group)]...
448.0 [0..3] [651..6]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSLAWKLL FLILTCKIET QVKCLKFDFP GFNVSNELEL IRDNSYIVFG AIQVTPDVTG  60
   61 GPGGTIANQA GRALYKKPFR LWSKHKSATF NTTFVINISN KTDPGGEGLA FVLTPEETAP 120
  121 QNSSGMWLGM VNERTNRNNE SRIVSVEFDT RKSHSDDLDG NHVALNVNNI NSVVQESLSG 180
  181 RGIKIDSGLD LTAHVRYDGK NLSVYVSRNL DVFEQRNLVF SRAIDLSAYL PETVYVGFTA 240
  241 STSNFTELNC VRSWSFEGLK IDGDGNMLWL WITIPIVFIV GIGAFLGALY LRSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 2fmdA
Description: No description for 2fmdA was found.

Predicted Domain #2
Region A:
Residues: [295-652]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKAGETNPDI EAELDNCAAN PQKFKLRELK RATGNFGAEN KLGQGGFGMV FKGKWQGRDI  60
   61 AVKRVSEKSH QGKQEFIAEI TTIGNLNHRN LVKLLGWCYE RKEYLLVYEY MPNGSLDKYL 120
  121 FLEDKSRSNL TWETRKNIIT GLSQALEYLH NGCEKRILHR DIKASNVMLD SDFNAKLGDF 180
  181 GLARMIQQSE MTHHSTKEIA GTPGYMAPET FLNGRATVET DVYAFGVLML EVVSGKKPSY 240
  241 VLVKDNQNNY NNSIVNWLWE LYRNGTITDA ADPGMGNLFD KEEMKSVLLL GLACCHPNPN 300
  301 QRPSMKTVLK VLTGETSPPD VPTERPAFVW PAMPPSFSDI DYSLTGSQIN SLTELTGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle