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View Structure Prediction Details

Protein: PRE1_ARATH
Organism: Arabidopsis thaliana
Length: 92 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRE1_ARATH.

Description E-value Query
Range
Subject
Range
PRE5_ARATH - Transcription factor PRE5 OS=Arabidopsis thaliana GN=PRE5 PE=1 SV=1
120.0 [0..1] [92..1]
ILI1_ORYSJ - Transcription factor ILI1 OS=Oryza sativa subsp. japonica GN=BHLH154 PE=1 SV=2
ILI1_ORYSI - Transcription factor ILI1 OS=Oryza sativa subsp. indica GN=ILI1 PE=3 SV=1
105.0 [0..17] [92..29]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRRSRQSS SAPRISDNQM IDLVSKLRQI LPEIGQRRRS DKASASKVLQ ETCNYIRNLN  60
   61 REVDNLSERL SQLLESVDED SPEAAVIRSL LM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.26
Match: 1nkpA
Description: Myc prot-oncogene protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle