| Protein: | E1313_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for E1313_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
450.0 | [0..22] | [456..21] |
|
|
447.0 | [0..1] | [501..1] |
|
|
443.0 | [0..1] | [470..1] |
|
|
437.0 | [0..23] | [491..20] |
|
Region A: Residues: [1-357] |
1 11 21 31 41 51
| | | | | |
1 MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY 60
61 NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN SVLPYYPTTK ITYITVGAES 120
121 TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY 180
181 FLRPMLEFLA ENKSPFMIDL YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD 240
241 AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG 300
301 TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNS
|
| Detection Method: |  |
| Confidence: | 86.522879 |
| Match: | 2cygA |
| Description: | Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [358-506] |
1 11 21 31 41 51
| | | | | |
1 SGTNSSGSSN SWCIASSKAS ERDLKGALDW ACGPGNVDCT AIQPSQPCFQ PDTLVSHASF 60
61 VFNSYFQQNR ATDVACSFGG AGVKVNKDPS YDKCIYITAG GNKTKATNAT ALTSSASTPR 120
121 GNELLQWILK LCLMISLFFS LQTMNSQAL
|
| Detection Method: | |
| Confidence: | 46.142668 |
| Match: | PF07983.4 |
| Description: | No description for PF07983.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.443 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.373 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.371 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.371 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.366 | N/A | N/A | a.186.1 | Description not found. |
| View | Download | 0.336 | N/A | N/A | a.216.1 | Description not found. |
| View | Download | 0.276 | N/A | N/A | c.80.1 | SIS domain |
| View | Download | 0.270 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.257 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.257 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.249 | N/A | N/A | d.113.1 | Nudix |
| View | Download | 0.244 | N/A | N/A | d.110.4 | SNARE-like |
