| Protein: | PTR6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
363.0 | [0..1] | [570..1] |
|
Region A: Residues: [1-473] |
1 11 21 31 41 51
| | | | | |
1 MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG 60
61 VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS LSSFLGMVLL WLTAMLPQVK 120
121 PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER 180
181 VLESFFGWYY ASSAVAVLIA FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT 240
241 RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI 300
301 SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS 360
361 MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP LASKIRGRPF RLSVKLRMGL 420
421 GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLA
|
| Detection Method: |  |
| Confidence: | 9.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.772207656683716 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [474-607] |
1 11 21 31 41 51
| | | | | |
1 EALTAIGQTE FFYTEFPKSM SSIAASLFGL GMAVASLLAS VVLNAVNELT SRNGKESWVS 60
61 DNINKGHYNY YYWVLAIMSF INVIYYVICS WSYGPLVDQV RNGRVNGVRE EEELIDIVGK 120
121 GFEKEDLSPV VKTN
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
