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View Structure Prediction Details

Protein: MHX_ARATH
Organism: Arabidopsis thaliana
Length: 539 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MHX_ARATH.

Description E-value Query
Range
Subject
Range
gi|109730377 - gi|109730377|gb|AAI16638.1| Slc24a2 protein [Mus musculus]
315.0 [0..5] [539..99]
gi|114623876, gi... - gi|55633235|ref|XP_528551.1| PREDICTED: similar to cone sodium-calcium potassium exchanger splice va...
312.0 [0..7] [539..98]
gi|219520100, gi... - gi|6708127|gb|AAF25811.1|AF177987_1 cone sodium-calcium potassium exchanger splice variant [Homo sap...
311.0 [0..7] [539..98]
gi|73971046 - gi|73971046|ref|XP_864952.1| PREDICTED: similar to Sodium/potassium/calcium exchanger 2 precursor (N...
310.0 [0..5] [539..98]
gi|109111430 - gi|109111430|ref|XP_001108699.1| PREDICTED: solute carrier family 24 (sodium/potassium/calcium excha...
308.0 [0..17] [539..108]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASILNQTQE LQESSKVLGH LRCENFFLFP GENTLSDGLR GVLYFLGLAY CFIGLSAITA  60
   61 RFFKSMENVV KHSRKVVTID PITKAEVITY KKVWNFTIAD ISLLAFGTSF PQISLATIDA 120
  121 IRNMGERYAG GLGPGTLVGS AAFDLFPIHA VCVVVPKAGE LKKISDLGVW LVELVWSFWA 180
  181 YIWLYIILEV WSPNVITLVE ALLTVLQYGL LLVHAYAQDK RWPYLSLPMS R

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 17.60206
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [232-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDRPEEWVPE EIDTSKDDND NDVHDVYSDA AQDAVESGSR NIVDIFSIHS ANNDTGITYH  60
   61 TVADTPPDSA TKKGKAKNST VFDIWKHQFV DAITLETSES 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.944 d.52.3 Prokaryotic type KH domain (KH-domain type II)

Predicted Domain #3
Region A:
Residues: [332-539]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKVDSIYLRI AKSFWHLLLA PWKLLFAFVP PCNIAHGWIA FICSLLFISG VAFVVTRFTD  60
   61 LISCVTGINP YVIAFTALAS GTSWPDLVAS KIAAERQLTA DSAIANITCS NSVNIYVGIG 120
  121 VPWLINTVYN YFAYREPLYI ENAKGLSFSL LIFFATSVGC IVVLVLRRLI IGAELGGPRL 180
  181 WAWLTSAYFM MLWVVFVVLS SLKVSGVI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.167491
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle