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View Structure Prediction Details

Protein: gi|12324497, gi|...
Organism: Arabidopsis thaliana
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12324497, gi|....

Description E-value Query
Range
Subject
Range
gi|12324503, gi|... - pir||G86462 AIG1-like protein, 37301-39301 [imported] - Arabidopsis thaliana, gi|15217719|ref|NP_17...
248.0 [0..1] [249..44]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTSELQAGG VTMECVMYRT AIKDGPIINV IDTPGLFDSS VSANYITTEI LKCLTMAEGG  60
   61 IHAFMFVLSA GNRITQEEES TLDTLQLIFD SKILDYFIVV FTGGDKLEAN EQTLDDYFSE 120
  121 GCPKFLTGVL RLCGGRKVVF NNMTKDKVKN AKQVKQLLAH VEAIEKNNGG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.154902
Match: 1h65A
Description: Chloroplast protein translocon GTPase Toc34
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [171-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPYTNQMHRM IKEKGDKLRE QQRKVKSKKL ASEIEVMKQD LELEHDEKMR RMTQLLERRL  60
   61 KQNSEAHERA MREMREAMRN YK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.09691
Match: 2i1jA
Description: No description for 2i1jA was found.

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