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View Structure Prediction Details

Protein: DNJ11_ARATH
Organism: Arabidopsis thaliana
Length: 161 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNJ11_ARATH.

Description E-value Query
Range
Subject
Range
DNAJ_MYCPE - Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1
DNAJ_MYCPE - Chaperone protein DnaJ OS=Mycoplasma penetrans (strain HF-2) GN=dnaJ PE=3 SV=1
148.0 [0..60] [157..1]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSSPTSFT HPFLSSSPPL SPISPPSRTA RISPPLVSAS CSYTYTEDSP RLHQIPRRLT  60
   61 TVPASLYDVL EVPLGATSQD IKSAYRRLAR ICHPDVAGTD RTSSSSADEF MKIHAAYCTL 120
  121 SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 1bq0A
Description: J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle