| Protein: | ERF25_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF25_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..6] | [231..2] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MSNNNNSPTT VNQETTTSRE VSITLPTDQS PQTSPGSSSS PSPRPSGGSP ARRTATGLSG 60
61 KHSIFRGIRL RNGKWVSEIR EPRKTTRIWL GTYPVPEMAA AAYDVAALAL KGPDAVLNF
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [120-232] |
1 11 21 31 41 51
| | | | | |
1 PGLALTYVAP VSNSAADIRA AASRAAEMKQ PDQGGDEKVL EPVQPGKEEE LEEVSCNSCS 60
61 LEFMDEEAML NMPTLLTEMA EGMLMSPPRM MIHPTMEDDS PENHEGDNLW SYK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.392 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
