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View Structure Prediction Details

Protein: UREF_ARATH
Organism: Arabidopsis thaliana
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UREF_ARATH.

Description E-value Query
Range
Subject
Range
gi|393298, gi|10... - gi|393298|dbj|BAA03327.1| urease accessory protein [Bacillus sp. TB-90], pir||E36950 ureF protein - ...
UREF_BACSB - Urease accessory protein UreF OS=Bacillus sp. (strain TB-90) GN=ureF PE=3 SV=1
262.0 [0..20] [240..5]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI  60
   61 IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN QVSSKASMSQ GSALFRIAAS 120
  121 VFTEVPNLKM IRDASLGS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNVCFHHAPI FGLVCGLLGM DSETSQRAYL FVTLRDVLSA ATRLNIVGPM GASVMQHRIA  60
   61 IVTETVLEKW MNREAGEACQ TSPLLDVVQG CHGYLFSRLF CS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle