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View Structure Prediction Details

Protein: FBX15_ARATH
Organism: Arabidopsis thaliana
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBX15_ARATH.

Description E-value Query
Range
Subject
Range
FB167_ARATH - Putative F-box protein At3g20030 OS=Arabidopsis thaliana GN=At3g20030 PE=4 SV=1
175.0 [0..6] [378..2]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSKRVYRS LPFELVEEIL KKTPAESLNR FKSTCKQWYG IITSKRFMYN HLDHSPERFI  60
   61 RIDDHKTVQI MDPMTGIFSD SPVPDVFRSP HSFASMVHCD GLMLCICSDS SYERTREANL 120
  121 AVWNPVTKKI KWIEPLDSYY ETDYFGIGYD NTCRENYKIV RFSGPMSFDD TECEIYEFKS 180
  181 DSWRTLDTKY WDVYTQCRGV SVKGNMYWIA DTKEKFILRF DFSMETFKNV CVCPPIGCTG 240
  241 RLGCFSGDRL PLLLQDTDFG GEEEVSTDIA VWLTNKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.522879
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [278-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDEVVSFTKY FNVTSPHLPL LQCHGDMARP GYFIGDHKNI LAWCEGEVEE DDKWYTCITL  60
   61 YQIDQCGIRK QIETGRHRSF RYLDPFICSY VYVPSLIPVP E

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.29243
Match: PF07734.4
Description: No description for PF07734.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.517 N/A N/A b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.517 N/A N/A b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.451 N/A N/A b.1.18 E set domains
View Download 0.438 N/A N/A d.20.1 UBC-like
View Download 0.424 N/A N/A d.129.6 Description not found.
View Download 0.384 N/A N/A b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3
View Download 0.358 N/A N/A b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3
View Download 0.237 N/A N/A b.33.1 ISP domain
View Download 0.232 N/A N/A b.1.12 Purple acid phosphatase, N-terminal domain
View Download 0.208 N/A N/A b.1.1 Immunoglobulin
View Download 0.207 N/A N/A b.50.1 Acid proteases


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle