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View Structure Prediction Details

Protein: FLA2_ARATH
Organism: Arabidopsis thaliana
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|13377778 - gi|13377778|gb|AAK20858.1|AF333971_1 fasciclin-like arabinogalactan-protein 2 [Arabidopsis thaliana]
334.0 [0..1] [403..1]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYLRRAATA LVLIFQLHLF LSLSNAHNIT RILAKDPDFS TFNHYLSATH LADEINRRQT  60
   61 ITVLAVDNSA MSSILSNGYS LYQIRNILSL HVLVDYFGTK KLHQITDGST STASMFQSTG 120
  121 SATGTSGYIN ITDIKGGKVA FGVQDDDSKL TAHYVKSVFE KPYNISVLHI SQVLTSPEAE 180
  181 APTASPSDLI LTTILEKQGC KAFSDILKST GADKTFQDTV DGGLTVFCPS DSAVGKFMPK 240
  241 FKSLSPANKT ALVLYHGMPV YQSLQMLRSG NGAVNTLATE GNNKFDFTVQ NDGEDVTLET 300
  301 DVVTAKVMGT LKDQEPLIVY KIDKVLLPRE IYKAVKTSAP APKSSKKKPK NAEADADGPS 360
  361 ADAPSDDDVE VADDKNGAVS AMITRTSNVV TAIVGLCFGV WLM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.221849
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle