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View Structure Prediction Details

Protein: GOLS2_ARATH
Organism: Arabidopsis thaliana
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GOLS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|4588376 - gi|4588376|gb|AAD26116.1|AF106954_1 galactinol synthase [Brassica napus]
275.0 [0..4] [335..6]

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Predicted Domain #1
Region A:
Residues: [1-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPEINTKLT VPVHSATGGE KRAYVTFLAG TGDYVKGVVG LAKGLRKAKS KYPLVVAVLP  60
   61 DVPEDHRKQL VDQGCVVKEI EPVYPPENQT EFAMAYYVIN YSKLRIWEFV EYNKMIYLDG 120
  121 DIQVFDNIDH LFDLPNGQFY AVMDCFCEKT WSHSPQYKIG YCQQCPDKVT WPEAKLGPKP 180
  181 PLYFNAGMFV YEPNLSTYHN LLETVKIVPP TLFAEQDFLN MYFKDIYKPI PPVYNLVLAM 240
  241 LWRHPENIEL DQVKVVHYCA AGAKPWRFTG EEENMDREDI KMLVKKWWDI YNDESLDYKN 300
  301 VVIGDSHKKQ QTLQQFIEAL SEAGALQYVK APSAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.39794
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.408140110158132 bayes_pls_golite062009
catalytic activity 0.222379358704242 bayes_pls_golite062009

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