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View Structure Prediction Details

Protein: NAC2_ARATH
Organism: Arabidopsis thaliana
Length: 289 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC2_ARATH.

Description E-value Query
Range
Subject
Range
gi|31322576 - gi|31322576|gb|AAP35053.1| NAC-domain protein 5-11 [Brassica napus]
354.0 [0..3] [289..2]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE  60
   61 KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP KPVGIKKALV FYAGKAPKGE 120
  121 KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE 180
  181 KPKVTEMVMP PPPQQTSEFA YFDTSDSVP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [210-289]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLHTTDSSCS EQVVSPEFTS EVQSEPKWKD WSAVSNDNNN TLDFGFNYID ATVDNAFGGG  60
   61 GSSNQMFPLQ DMFMYMQKPY 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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