YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: 5MAT_ARATH
Organism: Arabidopsis thaliana
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 5MAT_ARATH.

Description E-value Query
Range
Subject
Range
gi|186682529, gi... - gi|23129063|ref|ZP_00110897.1| COG1020: Non-ribosomal peptide synthetase modules and related protein...
341.0 [0..4] [449..1088]

Back

Predicted Domain #1
Region A:
Residues: [1-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNFNSAVNI LEVVQVSPPS SNSLTLPLTY FDLGWLKLHP VDRVLFYHVP ELTRSSLISK  60
   61 LKSSLSATLL HYLPLAGRLV WDSIKTKPSI VYSPDDKDAV YLTVAESNGD LSHLSGDEPR 120
  121 PATEFHSLVP ELPVSDESAR VLAVQVTFFP NQGFSLGVTA HHAVLDGKTT AMFLKAWAHN 180
  181 CKQEQEALPH DLVPSLDRII VQDPTGLETK LLNRWISASN NKPSLKLFPS KIIGSDILRV 240
  241 TYRLTREDIK KLRERVETES HAKQLRLSTF VITYAYVITC MVKMRGGDPT RFVCVGFASD 300
  301 FRSRLNPPLP PTFFGNCIVG SGDFDVKAEP ILEEGEGKGF ITAVETLTGW VNGLCPENIE 360
  361 KNMLLPFEAF KRMEPGRQMI SVAGSTRLGI YGSDFGWGKP VKVEIVTIDK DASVSLSESG 420
  421 DGSGGVEVGV CLKKDDVERF GSLFSIGLE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.0
Match: 2e1tA
Description: No description for 2e1tA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle