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View Structure Prediction Details

Protein: CRK38_ARATH
Organism: Arabidopsis thaliana
Length: 648 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRK38_ARATH.

Description E-value Query
Range
Subject
Range
gi|34393282, gi|... - gi|50938043|ref|XP_478549.1| putative serine/threonine kinase receptor precursor [Oryza sativa (japo...
460.0 [0..12] [645..21]

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Predicted Domain #1
Region A:
Residues: [1-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSAAIFLT SSLILLLQTL HGVKAGFICV GSSFPTNSSY QKNRDSLFST LSDKVTTNGG  60
   61 FYNASLDGVH VVGLCRRDYD RQGCINCVEE SIRQIKTSCS NRVQSFHCNS DDRERVSCLV 120
  121 RTTDQSTYRI LELGPATNDP SPVAIDTFAK NMTLFRQEWE AMVDRTLEAV TIDNSTTVLK 180
  181 YYGALKSEFS EFPNVYMMMQ CTPDINSGAC KRCLQASVTY FRDQNWGRQG GGICRPSCVF 240
  241 RWEFYPFYGA FANVTRVPAP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1g7yA
Description: Legume lectin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [261-648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRALIPRTEA ISITRLKGGI IAIFVVPIVI NLLVFIGLIR AYTRIRKSYN GINEAQYDYG  60
   61 GQSKLRFDFR MILTATDDFS FENKIGQGGF GSVYKGKLPG GEEIAVKRLT RGSGQGEIEF 120
  121 RNEVLLLTRL QHRNLVKLLG FCNEGDEEIL VYEFVPNSSL DHFIFDEEKR LLLTWDMRAR 180
  181 IIEGVARGLV YLHEDSQLRI IHRDLKASNI LLDAYMNPKV ADFGMARLFN MDQTRAVTRK 240
  241 VVGTFGYMAP EYVRNRTFSV KTDVYSFGVV LLEMITGRSN KNYFEALGLP AYAWKCWVAG 300
  301 EAASIIDHVL SRSRSNEIMR FIHIGLLCVQ ENVSKRPTMS LVIQWLGSET IAIPLPTVAG 360
  361 FTNASYQAEH EAGTLSLNEL SITELSPR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.0
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle