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View Structure Prediction Details

Protein: GRP17_ARATH
Organism: Arabidopsis thaliana
Length: 543 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRP17_ARATH.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
414.0 [0..108] [535..1388]

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Predicted Domain #1
Region A:
Residues: [1-543]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEELSQKPS SAQSLSLREG RNRFPFLSLS QREGRFFPSL SLSERDGRKF SFLSMFSFLM  60
   61 PLLEVIKIII ASVASVIFVG FACVTLAGSA AALVVSTPVF IIFSPVLVPA TIATVVLATG 120
  121 FTAGGSFGAT ALGLIMWLVK RRMGVKPKDN PPPAGLPPNS GAGAGGAQSL IKKSKAKSKG 180
  181 GLKAWCKKML KSKFGGKKGK SGGGKSKFGG KGGKSEGEEG MSSGDEGMSG SEGGMSGGEG 240
  241 GKSKSGKGKL KAKLEKKKGM SGGSESEEGM SGSEGGMSGG GGSKSKSKKS KLKAKLGKKK 300
  301 GMSGGMSGSE EGMSGSEGGM SSGGGSKSKS KKSKLKAKLG KKKSMSGGMS GSEEGMSGSE 360
  361 GGMSGGGGGK SKSRKSKLKA NLGKKKCMSG GMSGSEGGMS RSEGGISGGG MSGGSGSKHK 420
  421 IGGGKHGGLG GKFGKKRGMS GSGGGMSGSE GGVSGSEGSM SGGGMSGGSG SKHKIGGGKH 480
  481 GGLRGKFGKK RGMSGSEGGM SGSEGGMSES GMSGSGGGKH KIGGGKHKFG GGKHGGGGGH 540
  541 MAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.0
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle