| Protein: | Y1680_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 670 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1680_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..30] | [670..30] |
|
Region A: Residues: [1-267] |
1 11 21 31 41 51
| | | | | |
1 MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW 60
61 TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH NNLSGPIPNL SNLTALKLLF 120
121 LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN 180
181 INLSDLQDFN VSGNNFNGQI PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD 240
241 EAKASPLNKP ETVPSSPTSI HGGDKSN
|
| Detection Method: |  |
| Confidence: | 11.0 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [268-670] |
1 11 21 31 41 51
| | | | | |
1 NTSRISTISL IAIILGDFII LSFVSLLLYY CFWRQYAVNK KKHSKILEGE KIVYSSNPYP 60
61 TSTQNNNNQN QQVGDKGKMV FFEGTRRFEL EDLLRASAEM LGKGGFGTAY KAVLEDGNEV 120
121 AVKRLKDAVT VAGKKEFEQQ MEVLGRLRHT NLVSLKAYYF AREEKLLVYD YMPNGSLFWL 180
181 LHGNRGPGRT PLDWTTRLKI AAGAARGLAF IHGSCKTLKL THGDIKSTNV LLDRSGNARV 240
241 SDFGLSIFAP SQTVAKSNGY RAPELIDGRK HTQKSDVYSF GVLLLEILTG KCPNMVETGH 300
301 SGGAVDLPRW VQSVVREEWT AEVFDLELMR YKDIEEEMVG LLQIAMACTA VAADHRPKMG 360
361 HVVKLIEDIR GGGSEASPCN DGINSAVDSP CLSEDTCGGT TSQ
|
| Detection Method: | |
| Confidence: | 61.30103 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
