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View Structure Prediction Details

Protein: gi|25406256, gi|...
Organism: Arabidopsis thaliana
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25406256, gi|....

Description E-value Query
Range
Subject
Range
gi|5903105 - gi|5903105|gb|AAD55663.1|AC008017_36 Hypothetical protein [Arabidopsis thaliana]
318.0 [0..1] [469..1]

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Predicted Domain #1
Region A:
Residues: [1-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKNHSSRT TLSSSSSTSF SFRFTTIITL AFIFCSSYYI FFSQFDYSPV TSSPENPPFA  60
   61 GDLRDLTFPW NKLSLGPISE KLKLAVFCKS WPVGSIPGGM ERHAYTLYTS LASRGHEIHV 120
  121 FTVSSDRSNR EEYYNKGDLH VYFAPNEHGS LNHSRAFEIF HKINSLDHHS FDYVHTESVS 180
  181 LPHWRVKMVP NGDIAVTWHG IWYEIMHSNL FQELSNDRPS SDLQQTMPRL VDEIRFFPKY 240
  241 KQHICISNSA REVLVNIYQL PKRKVHVIVN GVDQTKFVYS PESGARFRAK HGIPDNGTYI 300
  301 VMGVSGRLVR DKGHPLLYEA FALLVKMHPK VYLLVAGSGP WGKRYAELGE NVRVLGALEP 360
  361 EELSGFYNAL DVFVNPTLRP QGLDLTIIEA MQCGKPVVAP NYPSIVGTVV VDERFGYTFS 420
  421 PNVRSLVETL DSVVRDGPRV LEMKGIACKG YALSMFTATQ MASAYERFFM CMKNERYCRY 480
  481 PLSTDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.045757
Match: 2gejA
Description: No description for 2gejA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle