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View Structure Prediction Details

Protein: OST3B_ARATH
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OST3B_ARATH.

Description E-value Query
Range
Subject
Range
gi|62897823 - gi|62897823|dbj|BAD96851.1| implantation-associated protein variant [Homo sapiens]
254.0 [0..7] [336..9]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKSKLVSL LFLIATLSST FAASFSDSDS DSDLLNELVS LRSTSESGVI HLDDHGISKF  60
   61 LTSASTPRPY SLLVFFDATQ LHSKNELRLQ ELRREFGIVS ASFLANNNGS EGTKLFFCEI 120
  121 EFSKSQSSFQ LFGVNALPHI RLVSPSISNL RDESGQMDQS DYSRLAESMA EFVEQRTKLK 180
  181 VGPIQRPPLL SKPQIGIIVA LIVIATPFII KRVLKGETIL HDTRLWLSGA IFIYFFSVAG 240
  241 TMHNIIRKMP MFLQDRNDPN KLVFFYQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.522879
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [269-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGMQLGAEGF AVGFLYTVVG LLLAFVTNVL VRVKNITAQR LIMLLALFIS FWAVKKVVYL  60
   61 DNWKTGYGIH PYWPSSWR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle