| Protein: | RLP24_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 159 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLP24_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..1] | [111..122] |
|
Region A: Residues: [1-60] |
1 11 21 31 41 51
| | | | | |
1 MRLEKCWFCS STIYPGHGIQ FVRNDAKIFR FCRSKCHKNF KMKRNPRKVK WTKAFRAAHG 60
61
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1s1iS |
| Description: | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [61-159] |
1 11 21 31 41 51
| | | | | |
1 KDMTKDTTFE FEKKRNRPER YDRNVTENTL MAIKKIAKIR TAREAKHIEN RLKPNKQKKL 60
61 NDDMKELDQN IHMVQAPGAQ KIKVDVSEKK SVQNEAMEE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.833 | N/A | N/A | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.796 | N/A | N/A | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.778 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.762 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.734 | N/A | N/A | a.24.4 | Hemerythrin |
