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View Structure Prediction Details

Protein: PLP3_ARATH
Organism: Arabidopsis thaliana
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLP3_ARATH.

Description E-value Query
Range
Subject
Range
PLP5_ARATH - Patatin-like protein 5 OS=Arabidopsis thaliana GN=PLP5 PE=1 SV=2
313.0 [0..18] [426..2]
gi|62766606 - gi|62766606|gb|AAX99411.1| patatin-like protein [Gossypium hirsutum]
309.0 [0..20] [428..17]
gi|115486249, gi... - gi|77552020|gb|ABA94817.1| Patatin-like phospholipase family protein, expressed [Oryza sativa (japon...
307.0 [0..31] [421..28]
gi|4539677, gi|2... - gi|4539677|gb|AAD22170.1|AF061282_24 patatin-like protein [Sorghum bicolor], gi|242071683|ref|XP_002...
303.0 [0..22] [421..12]

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Predicted Domain #1
Region A:
Residues: [1-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ  60
   61 LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH SRNSNRPLFE AKEIVPFYLK 120
  121 HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD 180
  181 IKKLQPVIFS SYQAVNNQAM NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG 240
  241 GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK 300
  301 WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD 360
  361 ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT NEEALKRFAK VLSEERKLRE 420
  421 SRSPKLKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 1oxwA
Description: Patatin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle