| Protein: | PTR31_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 563 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR31_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
332.0 | [0..5] | [552..22] |
|
Region A: Residues: [1-440] |
1 11 21 31 41 51
| | | | | |
1 MDLEQKTRGL SKSCALLIVI AGMERYAFKG VASNLVTYLT DVVKMSNSRA AKTVNTWAGF 60
61 TSMLPLFSAP LADTYWDRFF TILASSSVYF VGLVGLTWTA FAGSRSATKT ISSYFLYSSL 120
121 CLVSIGLGVL NPSLQAFGAD QLDHDLDKNF DLSSGDQKDA KATRKTQFFQ LWYFGVCTGS 180
181 LMGVTVMAYI QDTFGWVLGF AIPGIVIFLS ILVFMSGCGI YVYAPGARLK KKTTTTPFEK 240
241 ILKFIKGRVV KQRSIYTLAD EKDLDAMELE LEERPLCKCE TEDIETPSTT SKGLEDDESS 300
301 KTVFSGIDNV KLVIRLFPIW MMLLMFAVIF QLPATFFTKQ GVTMKRNIGS NFKIPPATLQ 360
361 STITLSIILL MPLYDKILIP ITKRIKKNGT GISVMERMGV GMFLSIIAIV IAAIVERKRL 420
421 AISQKMKTLP DYDPETVPLS
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.772207656683716 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [441-563] |
1 11 21 31 41 51
| | | | | |
1 IFWLLPQYIL LGISDIFTVV GMQEFFYSEV PVRMRTMGFA LYTSVFGVGS FVSAALISIV 60
61 EAYSSSTGDR QNWFADDMSE ARLDKYYWLL ALTSTISFVV YIFLCKFFKS SSDQGDEKEE 120
121 APK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
